GenPipes 3.1.2 Release Notes ============================a
New release GenPipes 3.1.2 is now available.
What’s new?
- many bugs and errors corrections
corrected file path within ini files
corrected typo in ampliconseq.py causing pipeline crash at plot heatmap
corrected reference to kallisto index & tx2gene files in the RNA-Seq light pipeline
fixed bug in tumor_pair pipeline bcbio_variation_recall step : corrected typo in the executable call
hicseq pipeline does now accommodate Arima digestion kit compatibility
Quick! Where can I find it? I can’t wait!
This version tarball is in: https://bitbucket.org/mugqic/genpipes/downloads/genpipes-3.1.2.tar.gz
The module mugqic/genpipes/3.1.2 is installed on Abacus, Guillimin, Mammouth-Mp2, Mammouth-Mp2b, Graham and Cedar clusters.
The source code is in bitbucket: https://bitbucket.org/mugqic/genpipes