Runtime Failure: Job fails on worker nodes

When you issue the pipeline commands, the jobs fail to run on worker nodes.

Fix

The most common reason for this failure is not setting up the .bashrc with mugqic modules. See details on accessing GenPipes on Compute Canada servers - Step 3: Setting up your user environment for GenPipes access. For other GenPipes Deployment Options, make sure you have closely followed the Checklist of Pre-requisites for Running GenPipes before actually issuing GenPipes pipeline run commands.