Latest GenPipes Release NoteΒΆ

GenPipes is a flexible Python-based framework that facilitates the development and deployment of multi-step workflows optimized for high-performance computing clusters and the cloud.

GenPipes comes with 12 pre-built, validated, scalable pipelines for various genomics applications, including RNA sequencing, chromatin immunoprecipitation sequencing, DNA sequencing, methylation sequencing, Hi-C, capture Hi-C, metagenomics, and SARS-CoV-2 genome sequencing pipeline. The software is available under a GPLv3 open source license and is continuously updated to follow recent advances in genomics and bioinformatics. The framework has already been configured on several servers, and a Docker image is also available to facilitate additional installations.

The latest release of GenPipes is 3.6.2. You can refer to the latest GenPipes Release note for details regarding what has changed. See Release Notes section of this documentation for details regarding prior GenPipes releases.