Casava SheetΒΆ

Casava Sheet is input data used in Illumina Run Processing Pipeline. It is a .csv format file with the following columns:

  • SampleID

  • FCID

  • SampleRef

  • Index

  • Description

  • Control

  • Recipe

  • Operator

  • SampleProject

Here is a sample of Casava Sheet:

FCID,Lane,SampleID,SampleRef,Index,Description,Control,Recipe,Operator,SampleProject
H84WNADXX,1,sample1_MPS0001,,TAAGGCGA-AGAGTAGA,,N,,,nanuq
H84WNADXX,1,sample47_MPS0047,,GTAGAGGA-CTAAGCCT,,N,,,nanuq

For more details, you can refer to Casava User Guide.