GenPipes 2.0.1 Release Notes

This is a minor release.

What’s new?

  • A critical issue in DNA-Seq pipeline during indel realignment; cf e-mail:!topic/mugqic_pipelines/eCeM3smfJ_o has been fixed in this release.

  • For Compute Canada deployed GenPipes, a new minor feature has been added: A warning is raised if the number of jobs created is over the cluster job submission limit (30000 jobs for abacus, 3000 jobs for guillimin, 2048 jobs for mammouth).

Quick! Where can I find it? I can’t wait!

This version tarball is in:

The module mugqic/mugqic_pipelines/2.0.1 is installed on abacus, guillimin and mammouth clusters.

The source code is in bitbucket: