:orphan:
  
.. _docs_gp_relnote_3_1_2:

.. spelling:word-list::

    ampliconseq
    heatmap
    tx
    bcbio
    Arima
    genpipes

GenPipes 3.1.2 Release Notes
============================a

New release GenPipes 3.1.2 is now available.

What's new?
-----------

* many bugs and errors corrections
   - corrected file path within ini files
   - corrected typo in ampliconseq.py causing pipeline crash at plot heatmap
   - corrected reference to kallisto index & tx2gene files in the RNA-Seq light pipeline
   - fixed bug in tumor_pair pipeline bcbio_variation_recall step : corrected typo in the executable call
* hicseq pipeline does now accommodate Arima digestion kit compatibility

Quick! Where can I find it? I can't wait!
-----------------------------------------

* This version tarball is in: https://bitbucket.org/mugqic/genpipes/downloads/genpipes-3.1.2.tar.gz

* The module mugqic/genpipes/3.1.2 is installed on Abacus, Guillimin, Mammouth-Mp2, Mammouth-Mp2b, Graham and Cedar clusters.

* The source code is in bitbucket: https://bitbucket.org/mugqic/genpipes